Program

Wednesday, December 13, 2017

Time Event  
09:00 - 09:15 Introduction  
09:15 - 10:15 Integrative and statistical approaches to model diseases  
09:15 - 09:30 › Modelling miRNA regulation in models of Huntington's disease - Lucile Mégret, Adaptation Biologique et Vieillissement  
09:30 - 09:45 › Computing competing risks based on family history in genetic disease with variable age at onset - Alexandra Lefebvre, Laboratoire de Probabilité et Modèles Aléatoires  
09:45 - 10:00 › Interrelations between lifestyle factors, gut microbiota characteristics, and cardiometabolic diseases in the European MetaCardis project - Karen Assman, Unité de Recherche sur les Maladies Cardiovasculaires, du Métabolisme et de la Nutrition  
10:00 - 10:15 › How pairwise coevolutionary models capture the collective residue variability in proteins - Pierre Barrat-Charlaix, Biologie Computationnelle et Quantitative  
10:15 - 10:45 Coffee break  
10:45 - 11:30 TBA - Vincent Fromion, Unité MaIAGE, INRA Jouy-en-Josas  
11:30 - 12:00 DNA structures, dynamics and interactions with proteins  
11:30 - 11:45 › Des noyaux et des polymères - Antony LESAGE, Laboratoire de Physique Théorique de la Matière Condensée  
11:45 - 12:00 › JET2DNA: towards an accurate prediction of multiple recognition patches in protein-DNA interactions - Flavia Corsi, Sorbonne Universités, UPMC University Paris 06, CNRS, IBPS, UMR 7238, Laboratoire de Biologie Computationnelle et Quantitative (LCQB), 75005 Paris, France, Sorbonne Universités, UPMC University Paris 06, Institut des sciences du calcul et des données, Paris, France  
12:00 - 12:30 Protein structures, dynamics and interactions I  
12:00 - 12:15 › Proteins and their multiple interaction sites - Dequeker Chloé, Laboratoire de Biologie Computationnelle et Quantitative  
12:15 - 12:30 › Structural and dynamics studies of a potassium channel and disease-associated mutants - Charline FAGNEN, Laboratoire de Biologie et de Pharmacologie Appliquée, Institut de minéralogie, de physique des matériaux et de cosmochimie  
12:30 - 14:00 Lunch  
14:00 - 14:45 Engineering small artificial RNAs - François Major, IRIC, Université de Montréal  
14:45 - 15:45 Protein structures, dynamics and interactions II  
14:45 - 15:00 › Computation of ribbons for interactive molecular modeling - Olivier Ameline, Laboratoire Jean Perrin  
15:00 - 15:15 › Gradient conjugué tronqué : vers des champs de forces polarisables haute performance - Felix Aviat, Laboratoire de chimie théorique  
15:15 - 15:30 › Hydrophobic Cluster Analysis for the investigation of protein interaction sites and remote homology. - Alexis Lamiable, Institut de minéralogie, de physique des matériaux et de cosmochimie  
15:30 - 15:45 › Design of stable cyclic peptides for therapeutic applications - Guillaume Postic, Institut de minéralogie, de physique des matériaux et de cosmochimie  
15:45 - 16:15 Coffee break  
16:15 - 17:00 Genomic and metagenomic sequence analysis  
16:15 - 16:30 › Reconstructing ancestral genomes and retracing past chromosomal rearrangements. - Fleiss Aubin, Biologie Computationnelle et Quantitative  
16:30 - 16:45 › Deep learning approaches on genomic and metagenomic sequences to create embedding and make decision. - Maxence Queyrel, Unité de Recherche sur les Maladies Cardiovasculaires, du Métabolisme et de la Nutrition  
16:45 - 17:00 › Improving domain annotation and functional characterization with clade-specific probabilistic models - Riccardo Vicedomini, Biologie Computationnelle et Quantitative  
  
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